Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 4b pilus protein pilo2 | UMNK88_RS27460 | Not Available | Negative | 81251 - 82546 | 48077.6 |
| piln family type ivb pilus formation outer membrane protein | UMNK88_RS27465 | Not Available | Negative | 82539 - 84221 | 59854.8 |
| type iv pilus biogenesis protein pilm | UMNK88_RS27470 | Not Available | Negative | 84235 - 84672 | 15718.0 |
| type iv pilus biogenesis lipoprotein pill | UMNK88_RS27475 | Not Available | Negative | 84672 - 85739 | 38610.0 |
| hypothetical protein | UMNK88_RS35475 | Not Available | Negative | 86068 - 86661 | 23366.0 |
| pili type iv pilus biogenesis protein | UMNK88_RS27485 | Not Available | Negative | 86711 - 87085 | 14595.5 |
| hypothetical protein | UMNK88_RS27490 | Not Available | Negative | 87247 - 87798 | 19774.6 |
| conjugal transfer protein trac | UMNK88_RS27495 | Not Available | Negative | 87971 - 88654 | 25925.3 |
| transcription termination/antitermination nusg family protein | UMNK88_RS27500 | Not Available | Negative | 88907 - 89440 | 20741.0 |
| helix-turn-helix transcriptional regulator | UMNK88_RS27505 | Not Available | Negative | 89882 - 90169 | 10807.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





