Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap family protein | MOC_RS04415 | Not Available | Positive | 967744 - 968358 | 22276.5 |
| hypothetical protein | MOC_RS29660 | Not Available | Negative | 969009 - 969200 | 6708.54 |
| pepsy-associated tm helix domain-containing protein | MOC_RS04420 | Not Available | Negative | 969197 - 970369 | 42448.4 |
| tonb-dependent siderophore receptor | MOC_RS04425 | Not Available | Negative | 970412 - 972649 | 80253.7 |
| zinc ribbon domain-containing protein | MOC_RS04430 | Not Available | Positive | 973343 - 974398 | 39227.8 |
| tartrate dehydrogenase | MOC_RS04435 | Not Available | Negative | 974516 - 975592 | 39104.0 |
| response regulator | MOC_RS04440 | Not Available | Positive | 975849 - 976583 | 26249.6 |
| cell wall metabolism sensor histidine kinase walk | MOC_RS04445 | Not Available | Positive | 976583 - 977956 | 48896.4 |
| gcg_crpn prefix-to-repeats domain-containing protein | MOC_RS04450 | Not Available | Positive | 978141 - 978404 | 8995.83 |
| gcg_crpn prefix-to-repeats domain-containing protein | MOC_RS04455 | Not Available | Positive | 978474 - 978809 | 12906.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


