Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | MOC_RS04240 | Not Available | Negative | 924581 - 925306 | 25053.7 |
| holliday junction branch migration dna helicase ruvb | MOC_RS04245 | Not Available | Negative | 925675 - 926730 | 38514.6 |
| hypothetical protein | MOC_RS04250 | Not Available | Positive | 926966 - 927196 | 8209.0 |
| hypothetical protein | MOC_RS04255 | Not Available | Positive | 927345 - 927734 | 13384.1 |
| hypothetical protein | MOC_RS04260 | Not Available | Negative | 927706 - 928062 | 13016.5 |
| ggdef domain-containing protein | MOC_RS04265 | Not Available | Positive | 928136 - 929032 | 32090.6 |
| luxr c-terminal-related transcriptional regulator | MOC_RS04270 | Not Available | Positive | 929245 - 929931 | 24358.1 |
| dna topoisomerase ib | MOC_RS04275 | Not Available | Negative | 929967 - 931220 | 45666.6 |
| glycosyltransferase | MOC_RS04280 | Not Available | Positive | 931357 - 932520 | 40187.0 |
| methyltransferase | MOC_RS04285 | Not Available | Positive | 932496 - 933182 | 24375.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


