Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | MOC_RS04095 | Not Available | Positive | 888369 - 888719 | 12271.8 |
| polyhydroxyalkanoic acid system family protein | MOC_RS04100 | Not Available | Positive | 888843 - 889157 | 11365.9 |
| hypothetical protein | MOC_RS04105 | Not Available | Positive | 889238 - 889474 | 7931.18 |
| atp-binding cassette domain-containing protein | MOC_RS04110 | Not Available | Positive | 889541 - 891343 | 65608.5 |
| carboxypeptidase m32 | MOC_RS04115 | Not Available | Positive | 891388 - 892887 | 54121.4 |
| atp-binding protein | MOC_RS04120 | Not Available | Negative | 892927 - 896403 | 125076.0 |
| dna repair exonuclease | MOC_RS04125 | Not Available | Negative | 896426 - 897664 | 44131.4 |
| endonuclease/exonuclease/phosphatase family protein | MOC_RS04130 | Not Available | Positive | 897933 - 898718 | 28315.8 |
| phospholipase d-like domain-containing protein | MOC_RS04135 | Not Available | Negative | 898636 - 900072 | 53139.7 |
| hypothetical protein | MOC_RS04140 | Not Available | Negative | 900139 - 900450 | 10815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


