Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | MOC_RS03810 | Not Available | Negative | 841680 - 842996 | 45258.7 |
| hypothetical protein | MOC_RS03815 | Not Available | Negative | 842996 - 843202 | 6639.61 |
| duf6894 family protein | MOC_RS03820 | Not Available | Negative | 843270 - 843527 | 9524.19 |
| hypothetical protein | MOC_RS03825 | Not Available | Negative | 843637 - 843900 | 10027.2 |
| nad-dependent epimerase | MOC_RS03830 | Not Available | Positive | 844440 - 845456 | 37116.4 |
| c-type cytochrome | MOC_RS03835 | Not Available | Positive | 845703 - 846068 | 12973.5 |
| marr family winged helix-turn-helix transcriptional regulator | MOC_RS03840 | Not Available | Negative | 846135 - 846653 | 19004.7 |
| site-specific tyrosine recombinase xerd | MOC_RS03845 | Not Available | Negative | 846782 - 847726 | 33637.3 |
| hypothetical protein | MOC_RS03850 | Not Available | Negative | 847723 - 847875 | 5454.86 |
| shikimate kinase | MOC_RS03855 | Not Available | Positive | 848131 - 848742 | 21946.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


