Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | MOC_RS03160 | Not Available | Negative | 706783 - 707859 | 37211.1 |
| duf952 domain-containing protein | MOC_RS03165 | Not Available | Negative | 707856 - 708206 | 12367.7 |
| helix-turn-helix transcriptional regulator | MOC_RS03170 | Not Available | Positive | 708522 - 709154 | 23201.8 |
| two-component system sensor histidine kinase ntrb | MOC_RS03175 | Not Available | Positive | 709251 - 710348 | 38755.5 |
| tim44-like domain-containing protein | MOC_RS03180 | Not Available | Positive | 710569 - 711540 | 33643.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | MOC_RS03185 | Not Available | Negative | 711586 - 712464 | 30860.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | MOC_RS03190 | Not Available | Negative | 712475 - 713590 | 38814.8 |
| lps-assembly protein lptd | MOC_RS03195 | Not Available | Negative | 713704 - 716283 | 95165.5 |
| lps export abc transporter permease lptg | MOC_RS03200 | Not Available | Negative | 716361 - 717449 | 38804.4 |
| lps export abc transporter permease lptf | MOC_RS03205 | Not Available | Negative | 717458 - 718618 | 41935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


