Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent methylenetetrahydromethanopterin dehydrogenase | MOC_RS03060 | Not Available | Positive | 684445 - 685338 | 31100.5 |
| atp-grasp domain-containing protein | MOC_RS03065 | Not Available | Positive | 685360 - 686511 | 39713.7 |
| methenyltetrahydromethanopterin cyclohydrolase | MOC_RS03070 | Not Available | Positive | 686508 - 687482 | 33280.3 |
| rimk family alpha-l-glutamate ligase | MOC_RS03075 | Not Available | Positive | 687595 - 688503 | 31903.3 |
| triphosphoribosyl-dephospho-coa synthase | MOC_RS03080 | Not Available | Positive | 688530 - 689363 | 28140.6 |
| 5,6,7,8-tetrahydromethanopterin hydro-lyase | MOC_RS03085 | Not Available | Positive | 689602 - 690114 | 18131.6 |
| hypothetical protein | MOC_RS30020 | Not Available | Negative | 690506 - 690757 | 9058.9 |
| chaperonin groel | MOC_RS03095 | Not Available | Negative | 690923 - 692563 | 57832.1 |
| co-chaperone groes | MOC_RS03100 | Not Available | Negative | 692638 - 692928 | 10551.8 |
| cora family divalent cation transporter | MOC_RS03105 | Not Available | Positive | 693142 - 694128 | 36251.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


