Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqb | MOC_RS03005 | Not Available | Negative | 674516 - 675415 | 32106.5 |
| pyrroloquinoline quinone precursor peptide pqqa | MOC_RS03010 | Not Available | Negative | 675448 - 675537 | 3221.81 |
| response regulator transcription factor | MOC_RS03015 | Not Available | Negative | 675762 - 676466 | 25641.0 |
| atp-binding protein | MOC_RS03020 | Not Available | Negative | 676463 - 678094 | 57918.4 |
| hypothetical protein | MOC_RS03025 | Not Available | Negative | 678161 - 678367 | 7742.41 |
| formylmethanofuran dehydrogenase subunit c | MOC_RS03030 | Not Available | Negative | 678452 - 679246 | 26795.2 |
| formylmethanofuran--tetrahydromethanopterin n-formyltransferase | MOC_RS03035 | Not Available | Negative | 679250 - 680197 | 32586.2 |
| formylmethanofuran dehydrogenase subunit a | MOC_RS03040 | Not Available | Negative | 680225 - 681871 | 58291.4 |
| formyl transferase | MOC_RS03045 | Not Available | Negative | 681865 - 682935 | 35991.7 |
| beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein | MOC_RS03055 | Not Available | Positive | 683381 - 684358 | 33266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


