Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | MOC_RS02755 | Not Available | Positive | 624258 - 624917 | 23491.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | MOC_RS02760 | Not Available | Positive | 624955 - 625698 | 25781.2 |
| imidazole glycerol phosphate synthase subunit hisf | MOC_RS02765 | Not Available | Positive | 625731 - 626534 | 27149.7 |
| dihydroorotase | MOC_RS02770 | Not Available | Positive | 626531 - 627835 | 45743.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | MOC_RS02775 | Not Available | Positive | 627835 - 628437 | 20091.2 |
| dna-processing protein dpra | MOC_RS02780 | Not Available | Positive | 628474 - 629685 | 42690.9 |
| holliday junction resolvase ruvx | MOC_RS02785 | Not Available | Negative | 629675 - 630181 | 18159.9 |
| smi1/knr4 family protein | MOC_RS02790 | Not Available | Negative | 630178 - 630747 | 19761.1 |
| hypothetical protein | MOC_RS30265 | Not Available | Positive | 630920 - 631060 | 5282.73 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | MOC_RS02800 | Not Available | Positive | 631244 - 631531 | 10253.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


