Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf485 domain-containing protein | MOC_RS27875 | Not Available | Negative | 6186364 - 6186735 | 13318.5 |
| acetate--coa ligase | MOC_RS27880 | Not Available | Negative | 6186872 - 6188818 | 71278.2 |
| pas domain-containing protein | MOC_RS27885 | Not Available | Negative | 6189120 - 6191630 | 85311.7 |
| phasin | MOC_RS27890 | Not Available | Positive | 6191900 - 6192388 | 17634.3 |
| hypothetical protein | MOC_RS27895 | Not Available | Positive | 6192520 - 6192855 | 11712.2 |
| l,d-transpeptidase | MOC_RS27900 | Not Available | Negative | 6192939 - 6193586 | 22935.1 |
| transglutaminase-like domain-containing protein | MOC_RS27905 | Not Available | Negative | 6193740 - 6194558 | 30766.6 |
| transglutaminase n-terminal domain-containing protein | MOC_RS27910 | Not Available | Negative | 6194636 - 6195565 | 34486.2 |
| response regulator | MOC_RS27915 | Not Available | Negative | 6195791 - 6196387 | 21039.2 |
| transglycosylase slt domain-containing protein | MOC_RS27920 | Not Available | Negative | 6196507 - 6197673 | 41499.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


