Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| presqualene diphosphate synthase hpnd | MOC_RS27025 | Not Available | Positive | 5989680 - 5990531 | 31327.8 |
| hydroxysqualene dehydroxylase hpne | MOC_RS27030 | Not Available | Positive | 5990531 - 5991832 | 45634.7 |
| squalene--hopene cyclase | MOC_RS27035 | Not Available | Positive | 5991875 - 5993872 | 74454.8 |
| phosphorylase | MOC_RS27040 | Not Available | Positive | 5994095 - 5994793 | 23304.9 |
| do family serine endopeptidase | MOC_RS27045 | Not Available | Negative | 5994971 - 5996497 | 51849.3 |
| hypothetical protein | MOC_RS27050 | Not Available | Positive | 5996826 - 5997191 | 13012.9 |
| valine--trna ligase | MOC_RS27055 | Not Available | Negative | 5997277 - 5999994 | 100319.0 |
| popz family protein | MOC_RS27060 | Not Available | Negative | 6000108 - 6000638 | 19229.7 |
| tolc family outer membrane protein | MOC_RS27065 | Not Available | Negative | 6000836 - 6002425 | 55843.6 |
| hypothetical protein | MOC_RS27070 | Not Available | Positive | 6003270 - 6003494 | 8466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


