Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | MOC_RS26285 | Not Available | Positive | 5842905 - 5843531 | 23082.8 |
| atp-dependent clp protease atp-binding subunit clpx | MOC_RS26290 | Not Available | Positive | 5843718 - 5844989 | 46481.0 |
| endopeptidase la | MOC_RS26295 | Not Available | Positive | 5845238 - 5847664 | 89251.4 |
| aspartate/glutamate racemase family protein | MOC_RS26300 | Not Available | Positive | 5847736 - 5848455 | 23982.0 |
| Trna-val | Not Available | Not Available | Positive | 5848517 - 5848592 | Not Available |
| methyl-accepting chemotaxis protein | MOC_RS26310 | Not Available | Negative | 5849059 - 5850747 | 58012.5 |
| alpha/beta fold hydrolase | MOC_RS26315 | Not Available | Negative | 5851175 - 5852086 | 32117.1 |
| sdr family oxidoreductase | MOC_RS26320 | Not Available | Negative | 5852087 - 5853100 | 35284.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | MOC_RS26325 | Not Available | Negative | 5853231 - 5854661 | 51357.2 |
| l-seryl-trna(sec) selenium transferase | MOC_RS26330 | Not Available | Positive | 5854849 - 5856291 | 50734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


