Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MOC_RS25550 | Not Available | Positive | 5694063 - 5694584 | 17346.2 |
| hypothetical protein | MOC_RS25555 | Not Available | Positive | 5694625 - 5694984 | 13244.9 |
| hypothetical protein | MOC_RS25560 | Not Available | Positive | 5694986 - 5695207 | 7165.63 |
| pepsy domain-containing protein | MOC_RS25565 | Not Available | Positive | 5695405 - 5695776 | 12921.7 |
| response regulator transcription factor | MOC_RS25570 | Not Available | Positive | 5695812 - 5696489 | 25131.1 |
| prpf domain-containing protein | MOC_RS25575 | Not Available | Positive | 5696486 - 5696851 | 12674.2 |
| sensor histidine kinase | MOC_RS25580 | Not Available | Positive | 5696867 - 5698285 | 51372.6 |
| c-type cytochrome biogenesis protein ccmi | MOC_RS25585 | Not Available | Positive | 5698475 - 5699965 | 52052.7 |
| cytochrome c maturation protein ccme | MOC_RS25590 | Not Available | Positive | 5700150 - 5700662 | 17968.6 |
| heme lyase ccmf/nrfe family subunit | MOC_RS25595 | Not Available | Positive | 5700673 - 5702673 | 70708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


