Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | MOC_RS25210 | Not Available | Positive | 5622722 - 5623450 | 25052.3 |
| amino acid abc transporter atp-binding protein | MOC_RS25215 | Not Available | Negative | 5623469 - 5624230 | 27448.5 |
| amino acid abc transporter permease | MOC_RS25220 | Not Available | Negative | 5624227 - 5624907 | 24546.7 |
| amino acid abc transporter substrate-binding protein | MOC_RS25225 | Not Available | Negative | 5625125 - 5625901 | 27560.8 |
| dihydrodipicolinate synthase family protein | MOC_RS25230 | Not Available | Positive | 5626230 - 5627156 | 33068.9 |
| pyridoxal phosphate-dependent aminotransferase | MOC_RS25235 | Not Available | Negative | 5627287 - 5628507 | 43528.7 |
| cytochrome ubiquinol oxidase subunit i | MOC_RS25240 | Not Available | Positive | 5628769 - 5630187 | 51445.7 |
| cytochrome d ubiquinol oxidase subunit ii | MOC_RS25245 | Not Available | Positive | 5630195 - 5631202 | 36053.5 |
| duf2474 family protein | MOC_RS25250 | Not Available | Positive | 5631202 - 5631324 | 4490.62 |
| gbsr/marr family transcriptional regulator | MOC_RS25255 | Not Available | Positive | 5631370 - 5631948 | 22392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


