Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phna-like protein | MOC_RS30855 | Not Available | Positive | 5480643 - 5480854 | 7655.98 |
| porin | MOC_RS24535 | Not Available | Positive | 5481337 - 5482992 | 58764.4 |
| hypothetical protein | MOC_RS29470 | Not Available | Positive | 5483410 - 5483688 | 8944.41 |
| phna-like protein | MOC_RS29475 | Not Available | Negative | 5483710 - 5484107 | 14261.0 |
| plp-dependent aminotransferase family protein | MOC_RS24545 | Not Available | Negative | 5484476 - 5485882 | 50605.4 |
| rida family protein | MOC_RS24550 | Not Available | Positive | 5486096 - 5486515 | 14936.8 |
| transporter substrate-binding domain-containing protein | MOC_RS24555 | Not Available | Positive | 5486519 - 5487349 | 29305.3 |
| amino acid abc transporter permease | MOC_RS24560 | Not Available | Positive | 5487395 - 5488048 | 23262.2 |
| amino acid abc transporter permease | MOC_RS24565 | Not Available | Positive | 5488045 - 5488701 | 24086.0 |
| amino acid abc transporter atp-binding protein | MOC_RS24570 | Not Available | Positive | 5488694 - 5489461 | 27980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


