Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding protein | MOC_RS22980 | Not Available | Positive | 5105038 - 5106192 | 40101.1 |
| branched-chain amino acid abc transporter permease | MOC_RS22985 | Not Available | Positive | 5106557 - 5107390 | 28807.6 |
| abc transporter permease subunit | MOC_RS22990 | Not Available | Positive | 5107383 - 5109188 | 62648.4 |
| abc transporter atp-binding protein | MOC_RS22995 | Not Available | Positive | 5109181 - 5109936 | 26040.2 |
| duf1028 domain-containing protein | MOC_RS23000 | Not Available | Positive | 5109940 - 5110884 | 32510.9 |
| amidase | MOC_RS23005 | Not Available | Positive | 5110877 - 5112277 | 48828.5 |
| hypothetical protein | MOC_RS23010 | Not Available | Positive | 5112444 - 5112674 | 8042.52 |
| duf1236 domain-containing protein | MOC_RS23015 | Not Available | Positive | 5112719 - 5113135 | 14351.1 |
| cher family methyltransferase | MOC_RS23020 | Not Available | Negative | 5113530 - 5117006 | 127620.0 |
| pas domain-containing protein | MOC_RS23025 | Not Available | Negative | 5116987 - 5117547 | 20487.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


