Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase hemj | MOC_RS22295 | Not Available | Negative | 4943029 - 4943460 | 16110.3 |
| uroporphyrinogen decarboxylase | MOC_RS22300 | Not Available | Negative | 4943471 - 4944622 | 40494.6 |
| pyruvate, water dikinase regulatory protein | MOC_RS22305 | Not Available | Positive | 4945085 - 4945915 | 30453.4 |
| fluoride efflux transporter crcb | MOC_RS22310 | Not Available | Negative | 4946032 - 4946421 | 12822.0 |
| hypothetical protein | MOC_RS22315 | Not Available | Negative | 4946758 - 4947267 | 18866.2 |
| ef-hand domain-containing protein | MOC_RS22320 | Not Available | Negative | 4947446 - 4947877 | 15104.0 |
| batd family protein | MOC_RS22325 | Not Available | Negative | 4947969 - 4949234 | 45451.8 |
| tetratricopeptide repeat protein | MOC_RS22330 | Not Available | Negative | 4949246 - 4950166 | 32296.2 |
| vwa domain-containing protein | MOC_RS22335 | Not Available | Negative | 4950166 - 4951095 | 31791.3 |
| vwa domain-containing protein | MOC_RS22340 | Not Available | Negative | 4951268 - 4952305 | 35794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


