Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | MOC_RS22245 | Not Available | Negative | 4933159 - 4934007 | 28915.9 |
| cation diffusion facilitator family transporter | MOC_RS22250 | Not Available | Negative | 4934004 - 4935005 | 34370.5 |
| maf family nucleotide pyrophosphatase | MOC_RS22255 | Not Available | Negative | 4935018 - 4935629 | 21193.6 |
| transcription termination factor rho | MOC_RS22260 | Not Available | Negative | 4936003 - 4937352 | 49858.1 |
| duf3429 domain-containing protein | MOC_RS22265 | Not Available | Positive | 4937759 - 4938262 | 17895.6 |
| histidine--trna ligase | MOC_RS22270 | Not Available | Positive | 4938410 - 4939957 | 55619.2 |
| hypothetical protein | MOC_RS22275 | Not Available | Positive | 4940036 - 4940278 | 8000.08 |
| atp phosphoribosyltransferase regulatory subunit | MOC_RS22280 | Not Available | Positive | 4940430 - 4941572 | 39870.6 |
| atp phosphoribosyltransferase | MOC_RS22285 | Not Available | Positive | 4941569 - 4942561 | 34697.7 |
| lysozyme inhibitor lpri family protein | MOC_RS22290 | Not Available | Negative | 4942608 - 4942961 | 12456.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


