Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sfnb family sulfur acquisition oxidoreductase | MOC_RS22000 | Not Available | Positive | 4877214 - 4878458 | 43470.6 |
| sfnb family sulfur acquisition oxidoreductase | MOC_RS22005 | Not Available | Positive | 4878469 - 4879707 | 44277.4 |
| llm class flavin-dependent oxidoreductase | MOC_RS22010 | Not Available | Positive | 4879707 - 4881086 | 50243.1 |
| transporter substrate-binding domain-containing protein | MOC_RS22015 | Not Available | Negative | 4881074 - 4882288 | 43219.9 |
| helix-turn-helix domain-containing protein | MOC_RS22020 | Not Available | Negative | 4882290 - 4883312 | 37357.0 |
| s8 family serine peptidase | MOC_RS30985 | Not Available | Positive | 4883839 - 4888251 | 143635.0 |
| hypothetical protein | MOC_RS22030 | Not Available | Positive | 4888298 - 4888495 | 7292.95 |
| response regulator | MOC_RS22035 | Not Available | Negative | 4888687 - 4889052 | 12685.4 |
| sensor histidine kinase | MOC_RS22040 | Not Available | Negative | 4889049 - 4890539 | 55066.2 |
| duf3016 domain-containing protein | MOC_RS22045 | Not Available | Negative | 4890872 - 4891441 | 20988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


