Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tartrate dehydrogenase | MOC_RS20555 | Not Available | Negative | 4568205 - 4569356 | 42501.4 |
| chloride channel protein | MOC_RS20560 | Not Available | Negative | 4569461 - 4571389 | 65695.3 |
| Trna-his | Not Available | Not Available | Positive | 4571611 - 4571687 | Not Available |
| isochorismatase family protein | MOC_RS20570 | Not Available | Positive | 4572254 - 4572787 | 18799.2 |
| sigma-70 family rna polymerase sigma factor | MOC_RS20575 | Not Available | Negative | 4572843 - 4573439 | 21461.8 |
| nepr family anti-sigma factor | MOC_RS20580 | Not Available | Negative | 4573436 - 4573696 | 8796.27 |
| Trna-thr | Not Available | Not Available | Positive | 4574210 - 4574284 | Not Available |
| hypothetical protein | MOC_RS20590 | Not Available | Negative | 4574358 - 4574735 | 13785.7 |
| hypothetical protein | MOC_RS20595 | Not Available | Negative | 4574788 - 4575165 | 13815.5 |
| response regulator | MOC_RS20600 | Not Available | Negative | 4575242 - 4575607 | 13099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


