Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monovalent cation:proton antiporter-2 (cpa2) family protein | MOC_RS20310 | Not Available | Positive | 4521614 - 4523590 | 68713.3 |
| mate family efflux transporter | MOC_RS20315 | Not Available | Positive | 4523608 - 4525044 | 48423.4 |
| duf937 domain-containing protein | MOC_RS20320 | Not Available | Positive | 4525153 - 4525926 | 26649.1 |
| cupin domain-containing protein | MOC_RS20325 | Not Available | Positive | 4526000 - 4526317 | 10971.8 |
| hypothetical protein | MOC_RS20330 | Not Available | Negative | 4526395 - 4526841 | 15830.8 |
| hypothetical protein | MOC_RS20335 | Not Available | Negative | 4526838 - 4527530 | 24823.8 |
| serine hydroxymethyltransferase | MOC_RS20340 | Not Available | Positive | 4527738 - 4529042 | 46274.1 |
| transcriptional regulator nrdr | MOC_RS20345 | Not Available | Positive | 4529145 - 4529678 | 19571.3 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | MOC_RS20350 | Not Available | Positive | 4529675 - 4530784 | 38124.8 |
| riboflavin synthase | MOC_RS20355 | Not Available | Positive | 4530788 - 4531408 | 21430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


