Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MOC_RS20155 | Not Available | Positive | 4490713 - 4491033 | 11646.5 |
| thymidine phosphorylase | MOC_RS20160 | Not Available | Negative | 4491091 - 4492389 | 44109.3 |
| deoxyribose-phosphate aldolase | MOC_RS20165 | Not Available | Negative | 4492392 - 4493123 | 25543.5 |
| purine-nucleoside phosphorylase | MOC_RS20170 | Not Available | Negative | 4493116 - 4493940 | 27903.6 |
| cytidine deaminase | MOC_RS20175 | Not Available | Negative | 4493933 - 4494361 | 14444.1 |
| anti-sigma factor | MOC_RS20180 | Not Available | Negative | 4494462 - 4495220 | 27257.3 |
| sigma-70 family rna polymerase sigma factor | MOC_RS20185 | Not Available | Negative | 4495324 - 4495959 | 23594.4 |
| glutathione peroxidase | MOC_RS20190 | Not Available | Negative | 4496018 - 4496572 | 19501.4 |
| patatin-like phospholipase family protein | MOC_RS20195 | Not Available | Negative | 4496634 - 4497758 | 40771.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | MOC_RS20200 | Not Available | Positive | 4498141 - 4499463 | 46569.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


