Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | MOC_RS20005 | Not Available | Negative | 4456277 - 4456687 | 15312.4 |
| sdr family nad(p)-dependent oxidoreductase | MOC_RS20010 | Not Available | Negative | 4456751 - 4457500 | 26598.1 |
| amidophosphoribosyltransferase | MOC_RS20015 | Not Available | Negative | 4457566 - 4459041 | 52967.5 |
| cvpa family protein | MOC_RS20020 | Not Available | Negative | 4459173 - 4459781 | 21479.5 |
| alanine racemase | MOC_RS20025 | Not Available | Positive | 4460045 - 4461154 | 37732.5 |
| dna repair protein rada | MOC_RS20030 | Not Available | Positive | 4461201 - 4462637 | 49958.0 |
| gtp 3',8-cyclase moaa | MOC_RS20035 | Not Available | Negative | 4462746 - 4463798 | 38691.0 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | MOC_RS20040 | Not Available | Positive | 4463880 - 4464302 | 15291.0 |
| cupin domain-containing protein | MOC_RS20045 | Not Available | Positive | 4464505 - 4464831 | 11724.1 |
| l,d-transpeptidase | MOC_RS20050 | Not Available | Negative | 4464884 - 4465549 | 23839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


