Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | MOC_RS19465 | Not Available | Negative | 4340809 - 4341588 | 27940.0 |
| 3-hydroxyisobutyrate dehydrogenase | MOC_RS19470 | Not Available | Negative | 4341585 - 4342478 | 29405.4 |
| enoyl-coa hydratase/isomerase family protein | MOC_RS19475 | Not Available | Negative | 4342661 - 4343722 | 37391.8 |
| isobutyryl-coa dehydrogenase | MOC_RS19480 | Not Available | Negative | 4343719 - 4344864 | 40898.9 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | MOC_RS19485 | Not Available | Negative | 4345061 - 4346557 | 53125.7 |
| lysr family transcriptional regulator | MOC_RS19490 | Not Available | Positive | 4346674 - 4347582 | 31889.5 |
| iron-containing alcohol dehydrogenase | MOC_RS19495 | Not Available | Positive | 4347671 - 4348834 | 40393.5 |
| abc transporter substrate-binding protein | MOC_RS19500 | Not Available | Negative | 4348939 - 4350168 | 43000.1 |
| flp pilus assembly protein cpab | MOC_RS19505 | Not Available | Positive | 4350427 - 4351242 | 28195.0 |
| type ii and iii secretion system protein family protein | MOC_RS19510 | Not Available | Positive | 4351278 - 4352810 | 52606.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


