Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof-type had-iib family hydrolase | MOC_RS19415 | Not Available | Positive | 4331672 - 4332493 | 28795.4 |
| lytic transglycosylase domain-containing protein | MOC_RS19420 | Not Available | Positive | 4332682 - 4333677 | 33234.4 |
| phna-like protein | MOC_RS19425 | Not Available | Positive | 4333991 - 4334896 | 32617.2 |
| serine o-acetyltransferase | MOC_RS19430 | Not Available | Positive | 4335124 - 4335975 | 30315.4 |
| duf3126 family protein | MOC_RS19435 | Not Available | Positive | 4336069 - 4336284 | 7973.33 |
| duf6949 family protein | MOC_RS19440 | Not Available | Positive | 4336429 - 4336758 | 11469.6 |
| transglutaminase-like cysteine peptidase | MOC_RS19445 | Not Available | Negative | 4336765 - 4337472 | 25944.9 |
| hypothetical protein | MOC_RS19450 | Not Available | Positive | 4337792 - 4338049 | 8906.6 |
| transglutaminase-like cysteine peptidase | MOC_RS19455 | Not Available | Negative | 4338056 - 4338688 | 22666.2 |
| amp-binding protein | MOC_RS19460 | Not Available | Negative | 4339011 - 4340744 | 62206.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


