Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | MOC_RS00020 | Not Available | Negative | 4080 - 4859 | 28101.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | MOC_RS00025 | Not Available | Positive | 4973 - 7174 | 78622.4 |
| lysr substrate-binding domain-containing protein | MOC_RS00030 | Not Available | Negative | 7171 - 8106 | 32842.8 |
| amino acid abc transporter substrate-binding protein | MOC_RS00035 | Not Available | Positive | 8267 - 9175 | 32285.0 |
| low specificity l-threonine aldolase | MOC_RS00040 | Not Available | Positive | 9195 - 10256 | 36904.6 |
| 3'-5' exonuclease | MOC_RS00045 | Not Available | Negative | 10263 - 11132 | 30527.1 |
| nad-dependent dna ligase liga | MOC_RS00050 | Not Available | Negative | 11205 - 13682 | 88416.8 |
| mfs transporter | MOC_RS00055 | Not Available | Negative | 13747 - 15039 | 44671.5 |
| 4'-phosphopantetheinyl transferase superfamily protein | MOC_RS00060 | Not Available | Positive | 15170 - 15886 | 25352.3 |
| Trna-pro | Not Available | Not Available | Positive | 15972 - 16048 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


