Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | MOC_RS19090 | Not Available | Negative | 4261371 - 4261994 | 22809.4 |
| yicc/yloc family endoribonuclease | MOC_RS19095 | Not Available | Positive | 4262250 - 4263107 | 30389.3 |
| guanylate kinase | MOC_RS19100 | Not Available | Positive | 4263160 - 4263822 | 24972.6 |
| dmt family transporter | MOC_RS19105 | Not Available | Negative | 4263836 - 4264282 | 15222.3 |
| lysr family transcriptional regulator | MOC_RS19110 | Not Available | Positive | 4264383 - 4265276 | 31228.2 |
| biliverdin-producing heme oxygenase | MOC_RS19115 | Not Available | Negative | 4265282 - 4265875 | 20569.6 |
| histidine kinase dimerization/phosphoacceptor domain -containing protein | MOC_RS19120 | Not Available | Negative | 4265872 - 4268487 | 93310.2 |
| dihydrolipoyl dehydrogenase | MOC_RS19125 | Not Available | Negative | 4268572 - 4269957 | 47966.3 |
| trna pseudouridine(55) synthase trub | MOC_RS19130 | Not Available | Negative | 4270092 - 4271108 | 36189.4 |
| 30s ribosome-binding factor rbfa | MOC_RS19135 | Not Available | Negative | 4271176 - 4271604 | 16062.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


