Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin fdxa | MOC_RS19040 | Not Available | Positive | 4250763 - 4251101 | 12420.5 |
| card family transcriptional regulator | MOC_RS19045 | Not Available | Positive | 4251608 - 4252213 | 22460.6 |
| rna polymerase factor sigma-32 | MOC_RS19050 | Not Available | Positive | 4252533 - 4253408 | 33050.6 |
| mfs transporter | MOC_RS19055 | Not Available | Negative | 4253615 - 4254847 | 42578.6 |
| protein-export chaperone secb | MOC_RS19060 | Not Available | Negative | 4255256 - 4255756 | 18066.5 |
| tim44/tima family putative adaptor protein | MOC_RS19065 | Not Available | Positive | 4256106 - 4256819 | 25864.6 |
| murein transglycosylase a | MOC_RS19070 | Not Available | Positive | 4256852 - 4258048 | 40666.7 |
| smr/muts family protein | MOC_RS19075 | Not Available | Positive | 4258045 - 4258680 | 22787.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | MOC_RS19080 | Not Available | Positive | 4258842 - 4259732 | 31834.4 |
| endolytic transglycosylase mltg | MOC_RS19085 | Not Available | Positive | 4259884 - 4261299 | 50380.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


