Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing sensor histidine kinase | MOC_RS17945 | Not Available | Negative | 4003112 - 4004620 | 53653.4 |
| response regulator transcription factor | MOC_RS17950 | Not Available | Negative | 4004617 - 4005312 | 25961.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4005680 - 4005795 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4005962 - 4008772 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4009101 - 4009176 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4009211 - 4009287 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4009473 - 4010959 | Not Available |
| duf2244 domain-containing protein | MOC_RS17980 | Not Available | Negative | 4011602 - 4012123 | 19537.7 |
| endonuclease iii | MOC_RS17985 | Not Available | Positive | 4012351 - 4013031 | 24329.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | MOC_RS17990 | Not Available | Positive | 4013262 - 4014056 | 30164.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


