Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | MOC_RS17300 | Not Available | Positive | 3866342 - 3867208 | 30284.1 |
| lysr family transcriptional regulator | MOC_RS17305 | Not Available | Positive | 3867713 - 3868606 | 32529.6 |
| putative hydro-lyase | MOC_RS17310 | Not Available | Positive | 3868772 - 3869587 | 28972.2 |
| mfs transporter | MOC_RS17315 | Not Available | Positive | 3869631 - 3870902 | 45253.4 |
| 5-oxoprolinase subunit pxpa | MOC_RS17320 | Not Available | Positive | 3870931 - 3871692 | 26228.4 |
| 5-oxoprolinase subunit b family protein | MOC_RS17325 | Not Available | Positive | 3871689 - 3872420 | 25719.6 |
| biotin-dependent carboxyltransferase family protein | MOC_RS17330 | Not Available | Positive | 3872420 - 3873436 | 34871.9 |
| aldolase | MOC_RS17335 | Not Available | Positive | 3873531 - 3874319 | 28424.8 |
| lytic murein transglycosylase | MOC_RS17340 | Not Available | Negative | 3874327 - 3875622 | 46140.8 |
| srpbcc family protein | MOC_RS17345 | Not Available | Positive | 3875757 - 3876251 | 17152.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


