Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | MOC_RS17150 | Not Available | Negative | 3835406 - 3836296 | 32366.0 |
| nuclear transport factor 2 family protein | MOC_RS17155 | Not Available | Negative | 3836376 - 3836840 | 18228.2 |
| pyridoxamine 5'-phosphate oxidase family protein | MOC_RS17160 | Not Available | Negative | 3836962 - 3839025 | 74024.8 |
| glutathione s-transferase family protein | MOC_RS17165 | Not Available | Negative | 3839082 - 3839699 | 22075.4 |
| hydroxyisourate hydrolase | MOC_RS17170 | Not Available | Positive | 3840039 - 3840392 | 12357.5 |
| transporter substrate-binding domain-containing protein | MOC_RS17175 | Not Available | Positive | 3840641 - 3841795 | 41304.1 |
| antar domain-containing response regulator | MOC_RS17180 | Not Available | Positive | 3841792 - 3842433 | 23028.1 |
| urea abc transporter substrate-binding protein | MOC_RS17185 | Not Available | Positive | 3842469 - 3843716 | 45630.4 |
| abc transporter permease subunit | MOC_RS17190 | Not Available | Positive | 3843779 - 3844651 | 29880.6 |
| branched-chain amino acid abc transporter permease | MOC_RS17195 | Not Available | Positive | 3844662 - 3845720 | 37354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


