Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | MOC_RS16885 | Not Available | Negative | 3761577 - 3761999 | 14759.6 |
| ubia family prenyltransferase | MOC_RS16890 | Not Available | Negative | 3762001 - 3763497 | 53231.2 |
| sialidase family protein | MOC_RS16895 | Not Available | Negative | 3763766 - 3766189 | 87634.2 |
| glycosyltransferase | MOC_RS16900 | Not Available | Negative | 3766557 - 3767555 | 36804.5 |
| glycosyltransferase | MOC_RS29190 | Not Available | Negative | 3767621 - 3768811 | 44091.7 |
| wecb/taga/cpsf family glycosyltransferase | MOC_RS28505 | Not Available | Negative | 3768901 - 3769785 | 33340.4 |
| sugar transferase | MOC_RS28510 | Not Available | Positive | 3771179 - 3771847 | 24540.2 |
| nad(p)-dependent oxidoreductase | MOC_RS29195 | Not Available | Positive | 3771985 - 3773028 | 37784.1 |
| hypothetical protein | MOC_RS29825 | Not Available | Negative | 3774481 - 3774819 | 12043.2 |
| o-antigen ligase | MOC_RS29200 | Not Available | Positive | 3775585 - 3776874 | 47227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


