Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | MOC_RS15975 | Not Available | Negative | 3563726 - 3564904 | 41802.6 |
| amylo-alpha-1,6-glucosidase | MOC_RS15980 | Not Available | Negative | 3564987 - 3567332 | 86735.9 |
| glycosyltransferase family 4 protein | MOC_RS15985 | Not Available | Negative | 3567481 - 3568611 | 41577.2 |
| 50s ribosomal protein l35 | MOC_RS15990 | Not Available | Positive | 3569258 - 3569461 | 7541.44 |
| 50s ribosomal protein l20 | MOC_RS15995 | Not Available | Positive | 3569513 - 3569890 | 14004.2 |
| phenylalanine--trna ligase subunit alpha | MOC_RS16000 | Not Available | Positive | 3570047 - 3571129 | 39827.8 |
| phenylalanine--trna ligase subunit beta | MOC_RS16005 | Not Available | Positive | 3571228 - 3573648 | 85244.6 |
| duf1186 domain-containing protein | MOC_RS16010 | Not Available | Positive | 3573658 - 3574539 | 32058.0 |
| hesa/moeb/thif family protein | MOC_RS16015 | Not Available | Negative | 3574528 - 3575313 | 26988.5 |
| translation initiation factor if-3 | MOC_RS16020 | Not Available | Negative | 3575417 - 3575938 | 19922.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


