Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yifb family mg chelatase-like aaa atpase | MOC_RS15930 | Not Available | Negative | 3554200 - 3555738 | 52961.2 |
| pepsy domain-containing protein | MOC_RS15935 | Not Available | Positive | 3555885 - 3556145 | 9482.48 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 3556187 - 3556285 | Not Available |
| dna polymerase iii subunit gamma/tau | MOC_RS15940 | Not Available | Positive | 3556321 - 3558186 | 66007.9 |
| ybab/ebfc family nucleoid-associated protein | MOC_RS15945 | Not Available | Positive | 3558260 - 3558583 | 11487.2 |
| phosphoenolpyruvate carboxykinase | MOC_RS15950 | Not Available | Negative | 3558798 - 3560417 | 58569.3 |
| recombination mediator recr | MOC_RS15955 | Not Available | Positive | 3560821 - 3561426 | 21595.1 |
| peptide deformylase | MOC_RS15960 | Not Available | Positive | 3561531 - 3562046 | 19231.2 |
| methionyl-trna formyltransferase | MOC_RS15965 | Not Available | Positive | 3562054 - 3562983 | 32160.1 |
| trna pseudouridine(38-40) synthase trua | MOC_RS15970 | Not Available | Positive | 3562983 - 3563744 | 27874.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


