Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | MOC_RS14725 | Not Available | Negative | 3286332 - 3287288 | 35099.3 |
| abc transporter substrate-binding protein | MOC_RS14730 | Not Available | Negative | 3287312 - 3288619 | 47145.1 |
| abc transporter atp-binding protein | MOC_RS14735 | Not Available | Negative | 3288691 - 3289752 | 38962.4 |
| fumarylacetoacetate hydrolase family protein | MOC_RS14740 | Not Available | Positive | 3290053 - 3291246 | 41916.9 |
| fad-binding oxidoreductase | MOC_RS14745 | Not Available | Positive | 3291307 - 3292674 | 48192.1 |
| duf167 family protein | MOC_RS14750 | Not Available | Positive | 3292685 - 3292966 | 9990.19 |
| 3-keto-5-aminohexanoate cleavage protein | MOC_RS14755 | Not Available | Negative | 3293150 - 3294079 | 33595.4 |
| 3-hydroxyacyl-coa dehydrogenase | MOC_RS14760 | Not Available | Negative | 3294082 - 3295005 | 32656.0 |
| branched-chain amino acid abc transporter atp-binding protein/permease | MOC_RS14765 | Not Available | Negative | 3295002 - 3297560 | 90859.0 |
| branched-chain amino acid abc transporter permease | MOC_RS14770 | Not Available | Negative | 3297575 - 3298450 | 30647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


