Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate/nitrite transporter family protein | MOC_RS14045 | Not Available | Negative | 3132518 - 3133366 | 29940.4 |
| gamma-glutamylcyclotransferase family protein | MOC_RS14050 | Not Available | Negative | 3133513 - 3133944 | 15450.8 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | MOC_RS14055 | Not Available | Negative | 3134353 - 3136356 | 71894.5 |
| hypothetical protein | MOC_RS14060 | Not Available | Negative | 3136457 - 3136897 | 15571.5 |
| l,d-transpeptidase | MOC_RS14065 | Not Available | Negative | 3137060 - 3137638 | 21099.4 |
| histone deacetylase family protein | MOC_RS14070 | Not Available | Positive | 3137831 - 3138760 | 33390.6 |
| lyse family translocator | MOC_RS14075 | Not Available | Positive | 3138912 - 3139529 | 21302.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | MOC_RS14080 | Not Available | Negative | 3139536 - 3140612 | 38098.7 |
| chorismate synthase | MOC_RS14085 | Not Available | Negative | 3140645 - 3141745 | 39176.3 |
| duf3578 domain-containing protein | MOC_RS14090 | Not Available | Negative | 3141982 - 3142599 | 21478.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


