Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-550 pedf | MOC_RS12820 | Not Available | Negative | 2896976 - 2897404 | 15065.0 |
| abc transporter substrate-binding protein | MOC_RS12825 | Not Available | Positive | 2897623 - 2898858 | 43782.5 |
| yvtn family beta-propeller repeat protein | MOC_RS12830 | Not Available | Positive | 2898855 - 2899862 | 35419.0 |
| 4fe-4s binding protein | MOC_RS12835 | Not Available | Positive | 2900204 - 2902357 | 76275.2 |
| fad:protein fmn transferase | MOC_RS12840 | Not Available | Positive | 2902354 - 2903331 | 33041.5 |
| serine hydrolase domain-containing protein | MOC_RS12845 | Not Available | Positive | 2903476 - 2904606 | 41119.4 |
| m20 family metallopeptidase | MOC_RS12850 | Not Available | Negative | 2904802 - 2905953 | 39434.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | MOC_RS12855 | Not Available | Negative | 2906122 - 2907948 | 65177.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | MOC_RS12860 | Not Available | Negative | 2908096 - 2909472 | 46787.3 |
| rna polymerase factor sigma-54 | MOC_RS12865 | Not Available | Negative | 2909547 - 2911121 | 57067.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


