Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | MOC_RS12625 | Not Available | Negative | 2846254 - 2846805 | 20219.0 |
| duf6925 family protein | MOC_RS12630 | Not Available | Positive | 2846981 - 2847892 | 31492.9 |
| hypothetical protein | MOC_RS12635 | Not Available | Negative | 2847901 - 2848329 | 14961.9 |
| hypothetical protein | MOC_RS30095 | Not Available | Negative | 2848357 - 2848524 | 6026.3 |
| hypothetical protein | MOC_RS12640 | Not Available | Negative | 2848626 - 2849909 | 45512.5 |
| 7-carboxy-7-deazaguanine synthase | MOC_RS12645 | Not Available | Negative | 2850120 - 2850752 | 22269.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | MOC_RS12650 | Not Available | Positive | 2851018 - 2852550 | 52580.9 |
| gtp-binding protein | MOC_RS12655 | Not Available | Positive | 2852617 - 2853708 | 39065.6 |
| hypothetical protein | MOC_RS12660 | Not Available | Positive | 2853812 - 2854675 | 30684.8 |
| endonuclease iii | MOC_RS12665 | Not Available | Positive | 2854838 - 2855458 | 21825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


