Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | MOC_RS12530 | Not Available | Negative | 2821783 - 2823147 | 47789.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | MOC_RS12535 | Not Available | Negative | 2823349 - 2824434 | 39110.7 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | MOC_RS12540 | Not Available | Negative | 2824512 - 2825960 | 49894.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | MOC_RS12545 | Not Available | Negative | 2825981 - 2827438 | 49887.5 |
| penicillin-binding protein 2 | MOC_RS12550 | Not Available | Negative | 2827449 - 2829338 | 67713.8 |
| hypothetical protein | MOC_RS12555 | Not Available | Negative | 2829345 - 2829758 | 14953.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | MOC_RS12560 | Not Available | Negative | 2829755 - 2830747 | 35120.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2831247 - 2831645 | Not Available |
| voc family protein | MOC_RS12565 | Not Available | Negative | 2831699 - 2832139 | 16525.6 |
| aminopeptidase n | MOC_RS12570 | Not Available | Positive | 2832539 - 2835160 | 94809.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


