Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | MOC_RS12240 | Not Available | Negative | 2756894 - 2758162 | 44706.2 |
| hypothetical protein | MOC_RS30090 | Not Available | Negative | 2758754 - 2758930 | 6533.12 |
| cmpa/nrta family abc transporter substrate-binding protein | MOC_RS12245 | Not Available | Negative | 2759061 - 2760062 | 35486.6 |
| antar domain-containing response regulator | MOC_RS12250 | Not Available | Negative | 2760059 - 2760646 | 21515.4 |
| hypothetical protein | MOC_RS12255 | Not Available | Positive | 2760869 - 2761465 | 19905.0 |
| glycoside hydrolase family 15 protein | MOC_RS12260 | Not Available | Positive | 2761573 - 2763462 | 69620.7 |
| transketolase | MOC_RS12265 | Not Available | Positive | 2763459 - 2765534 | 73951.8 |
| bifunctional transaldolase/phosoglucose isomerase | MOC_RS12270 | Not Available | Positive | 2765768 - 2768614 | 101491.0 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | MOC_RS12275 | Not Available | Positive | 2768726 - 2769703 | 34960.6 |
| 6-phosphogluconolactonase | MOC_RS12280 | Not Available | Positive | 2769769 - 2770494 | 25520.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


