Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | MOC_RS12040 | Not Available | Negative | 2718629 - 2719861 | 42382.5 |
| extensin family protein | MOC_RS12045 | Not Available | Positive | 2719973 - 2720959 | 35088.0 |
| hypothetical protein | MOC_RS12050 | Not Available | Positive | 2721156 - 2721617 | 17192.5 |
| ribonuclease t2 family protein | MOC_RS12055 | Not Available | Positive | 2721620 - 2722282 | 23371.9 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | MOC_RS12060 | Not Available | Positive | 2722349 - 2723197 | 30981.3 |
| porin | MOC_RS12065 | Not Available | Positive | 2723420 - 2724697 | 45485.4 |
| hypothetical protein | MOC_RS12070 | Not Available | Positive | 2724964 - 2725242 | 9894.91 |
| gnat family n-acetyltransferase | MOC_RS12075 | Not Available | Negative | 2725286 - 2725840 | 19572.4 |
| peptidoglycan dd-metalloendopeptidase family protein | MOC_RS12080 | Not Available | Positive | 2726043 - 2727554 | 51295.3 |
| yidb family protein | MOC_RS12085 | Not Available | Negative | 2727673 - 2728014 | 12074.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


