Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tade/tadg family type iv pilus assembly protein | MOC_RS11100 | Not Available | Negative | 2512295 - 2512882 | 20413.7 |
| tade/tadg family type iv pilus assembly protein | MOC_RS11105 | Not Available | Negative | 2512876 - 2513487 | 21978.4 |
| tade/tadg family type iv pilus assembly protein | MOC_RS11110 | Not Available | Positive | 2513898 - 2515277 | 47730.6 |
| hd-gyp domain-containing protein | MOC_RS11115 | Not Available | Positive | 2515332 - 2516369 | 37543.5 |
| atp-binding protein | MOC_RS11120 | Not Available | Positive | 2516435 - 2519167 | 93799.2 |
| capsule biosynthesis protein | MOC_RS11125 | Not Available | Negative | 2519575 - 2520819 | 45867.2 |
| duf2254 domain-containing protein | MOC_RS11130 | Not Available | Negative | 2521594 - 2522841 | 44499.6 |
| efflux rnd transporter permease subunit | MOC_RS11135 | Not Available | Negative | 2522924 - 2526088 | 113323.0 |
| efflux rnd transporter periplasmic adaptor subunit | MOC_RS11140 | Not Available | Positive | 2526201 - 2527418 | 43526.7 |
| hypothetical protein | MOC_RS11145 | Not Available | Positive | 2527399 - 2527755 | 12790.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


