Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | MOC_RS10620 | Not Available | Negative | 2410916 - 2411542 | 22885.3 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | MOC_RS10625 | Not Available | Negative | 2411667 - 2412482 | 27032.6 |
| thiamine phosphate synthase | MOC_RS10630 | Not Available | Negative | 2412479 - 2413189 | 24028.8 |
| nudix hydrolase | MOC_RS10635 | Not Available | Positive | 2413389 - 2414384 | 36648.9 |
| duf333 domain-containing protein | MOC_RS10640 | Not Available | Negative | 2414808 - 2415089 | 9682.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | MOC_RS10645 | Not Available | Negative | 2415104 - 2415922 | 29163.4 |
| rhodanese-like domain-containing protein | MOC_RS10650 | Not Available | Negative | 2416102 - 2416698 | 20947.2 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | MOC_RS10655 | Not Available | Negative | 2416701 - 2417540 | 29864.6 |
| quinoprotein relay system zinc metallohydrolase 2 | MOC_RS10660 | Not Available | Negative | 2417583 - 2418551 | 34412.2 |
| tetr/acrr family transcriptional regulator | MOC_RS10665 | Not Available | Positive | 2418678 - 2419244 | 19974.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


