Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ring-cleaving dioxygenase | MOC_RS09880 | Not Available | Positive | 2246648 - 2247598 | 34060.2 |
| ferredoxin--nadp reductase | MOC_RS09885 | Not Available | Positive | 2247913 - 2248686 | 29301.2 |
| helix-turn-helix transcriptional regulator | MOC_RS09890 | Not Available | Negative | 2248712 - 2249005 | 10141.2 |
| trove domain-containing protein | MOC_RS09895 | Not Available | Positive | 2250073 - 2251647 | 55253.6 |
| duf3971 domain-containing protein | MOC_RS09900 | Not Available | Negative | 2251682 - 2255131 | 120086.0 |
| peroxiredoxin | MOC_RS09905 | Not Available | Positive | 2255315 - 2255782 | 16624.0 |
| m23 family metallopeptidase | MOC_RS09910 | Not Available | Positive | 2255881 - 2257071 | 41566.4 |
| uma2 family endonuclease | MOC_RS09915 | Not Available | Positive | 2257443 - 2258006 | 20525.0 |
| hypothetical protein | MOC_RS09920 | Not Available | Positive | 2258056 - 2258397 | 12312.9 |
| duf1206 domain-containing protein | MOC_RS09925 | Not Available | Positive | 2258542 - 2259393 | 29035.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


