Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese-binding transcriptional regulator mntr | MOC_RS08990 | Not Available | Positive | 2055963 - 2056424 | 17032.1 |
| putative zinc-binding metallopeptidase | MOC_RS08995 | Not Available | Negative | 2056449 - 2057633 | 44320.7 |
| duf2126 domain-containing protein | MOC_RS09000 | Not Available | Positive | 2057852 - 2061130 | 119951.0 |
| circularly permuted type 2 atp-grasp protein | MOC_RS09005 | Not Available | Positive | 2061393 - 2063930 | 91312.9 |
| transglutaminase n-terminal domain-containing protein | MOC_RS09010 | Not Available | Positive | 2063927 - 2064826 | 32304.7 |
| pyridoxamine 5'-phosphate oxidase family protein | MOC_RS09015 | Not Available | Negative | 2064922 - 2065533 | 21497.8 |
| lysine--trna ligase | MOC_RS09020 | Not Available | Negative | 2065556 - 2067259 | 62410.1 |
| transporter substrate-binding domain-containing protein | MOC_RS09025 | Not Available | Negative | 2067465 - 2068334 | 30653.5 |
| hypothetical protein | MOC_RS09030 | Not Available | Positive | 2068387 - 2069301 | 31329.5 |
| hypothetical protein | MOC_RS29735 | Not Available | Positive | 2069603 - 2070184 | 21811.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


