Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | MOC_RS28920 | Not Available | Positive | 1684614 - 1686281 | 62547.1 |
| Trna-arg | Not Available | Not Available | Positive | 1686252 - 1686328 | Not Available |
| is5 family transposase | MOC_RS07435 | Not Available | Positive | 1686524 - 1687339 | 30209.1 |
| acyltransferase | MOC_RS07440 | Not Available | Positive | 1688151 - 1689245 | 38964.6 |
| rna polymerase sigma factor region1.1 domain-containing protein | MOC_RS07445 | Not Available | Positive | 1689329 - 1689751 | 14237.3 |
| phage holin family protein | MOC_RS07450 | Not Available | Positive | 1689831 - 1690220 | 13892.5 |
| sensor histidine kinase | MOC_RS07455 | Not Available | Negative | 1690449 - 1692209 | 62367.0 |
| pas domain-containing sensor histidine kinase | MOC_RS07460 | Not Available | Negative | 1692216 - 1695077 | 104035.0 |
| hypothetical protein | MOC_RS07465 | Not Available | Negative | 1695231 - 1695449 | 8032.55 |
| mfs transporter | MOC_RS07470 | Not Available | Positive | 1695672 - 1696916 | 42010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


