Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arge/dape family deacylase | MOC_RS05955 | Not Available | Negative | 1301113 - 1302405 | 46341.6 |
| lysr family transcriptional regulator | MOC_RS05960 | Not Available | Negative | 1302492 - 1303376 | 31542.5 |
| nad(p)h-dependent flavin oxidoreductase | MOC_RS05965 | Not Available | Positive | 1303513 - 1304496 | 33875.6 |
| l,d-transpeptidase | MOC_RS05970 | Not Available | Positive | 1304607 - 1305242 | 23150.4 |
| srpbcc family protein | MOC_RS05975 | Not Available | Positive | 1305395 - 1305880 | 17062.4 |
| hypothetical protein | MOC_RS05980 | Not Available | Positive | 1306078 - 1306422 | 11410.8 |
| formate dehydrogenase accessory protein fdhe | MOC_RS05985 | Not Available | Negative | 1306677 - 1307672 | 35587.3 |
| formate dehydrogenase subunit gamma | MOC_RS05990 | Not Available | Negative | 1307676 - 1308398 | 26939.8 |
| formate dehydrogenase subunit beta | MOC_RS05995 | Not Available | Negative | 1308599 - 1309534 | 33958.1 |
| formate dehydrogenase-n subunit alpha | MOC_RS06000 | Not Available | Negative | 1309548 - 1312628 | 113879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


