Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | MOC_RS05205 | Not Available | Positive | 1139382 - 1140005 | 21830.6 |
| Trna-tyr | Not Available | Not Available | Positive | 1140023 - 1140106 | Not Available |
| dead/deah box helicase | MOC_RS05215 | Not Available | Positive | 1140408 - 1142213 | 64754.6 |
| hypothetical protein | MOC_RS05220 | Not Available | Positive | 1142237 - 1142560 | 11343.2 |
| duf3597 domain-containing protein | MOC_RS05225 | Not Available | Positive | 1142658 - 1143059 | 13736.3 |
| ankyrin repeat domain-containing protein | MOC_RS05230 | Not Available | Positive | 1143270 - 1143941 | 24444.1 |
| polyamine abc transporter substrate-binding protein | MOC_RS05235 | Not Available | Negative | 1144093 - 1145220 | 41303.6 |
| rida family protein | MOC_RS05240 | Not Available | Negative | 1145217 - 1145573 | 12605.2 |
| glsb/yeaq/ymge family stress response membrane protein | MOC_RS05245 | Not Available | Positive | 1145756 - 1146019 | 9021.42 |
| duf2892 domain-containing protein | MOC_RS05250 | Not Available | Negative | 1146098 - 1146319 | 7425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


