Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | MOC_RS05155 | Not Available | Positive | 1126828 - 1127790 | 33435.7 |
| adp-forming succinate--coa ligase subunit beta | MOC_RS05160 | Not Available | Positive | 1127893 - 1129089 | 41600.2 |
| succinate--coa ligase subunit alpha | MOC_RS05165 | Not Available | Positive | 1129092 - 1129976 | 29908.3 |
| 2-oxoglutarate dehydrogenase e1 component | MOC_RS05170 | Not Available | Positive | 1130149 - 1133148 | 111385.0 |
| ycii family protein | MOC_RS05175 | Not Available | Positive | 1133159 - 1133458 | 10544.5 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | MOC_RS05180 | Not Available | Positive | 1133508 - 1134836 | 46330.5 |
| sdr family oxidoreductase | MOC_RS05185 | Not Available | Positive | 1134844 - 1135599 | 25247.4 |
| dihydrolipoyl dehydrogenase | MOC_RS05190 | Not Available | Positive | 1135667 - 1137070 | 48497.4 |
| response regulator | MOC_RS05195 | Not Available | Negative | 1137287 - 1138144 | 30893.5 |
| tyrosine recombinase xerc | MOC_RS05200 | Not Available | Negative | 1138300 - 1139268 | 34647.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


