Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium oryzae |
| Strain | CBMB20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | stem surface of rice |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
949755 bp
Thymine Count
950441 bp
Guanine Count
2195423 bp
Cytosine Count
2190998 bp
Genome Length
6286629 bp
Protein-coding Genes
5743 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin family protein | MOC_RS00320 | Not Available | Positive | 65890 - 66429 | 19544.8 |
| alpha/beta fold hydrolase | MOC_RS00325 | Not Available | Positive | 66426 - 67364 | 34489.3 |
| helix-turn-helix domain-containing protein | MOC_RS00330 | Not Available | Positive | 67764 - 68204 | 15411.3 |
| cupin domain-containing protein | MOC_RS00335 | Not Available | Positive | 68263 - 68637 | 13335.9 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | MOC_RS00340 | Not Available | Negative | 68644 - 69201 | 19535.3 |
| pseudouridine synthase | MOC_RS00345 | Not Available | Negative | 69198 - 70958 | 62322.4 |
| duf1328 domain-containing protein | MOC_RS28610 | Not Available | Negative | 71078 - 71254 | 6012.79 |
| csbd family protein | MOC_RS00355 | Not Available | Negative | 71332 - 71523 | 6345.49 |
| nucleoside deaminase | MOC_RS00360 | Not Available | Positive | 71667 - 72158 | 17274.6 |
| outer membrane beta-barrel protein | MOC_RS00365 | Not Available | Negative | 72254 - 73549 | 46700.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


